Bridgedb Org Tools

Open Data

bridgedb webservices API

This MCP server bundle is compatible with any MCP client including Claude Desktop, Cursor, and other Model Context Protocol implementations.

13 tools

Tools in this Bundle (13)

Get Organism Attributes Systemcode Identifier

Global
v1.0.0

Returns the attributes for a given identifier, data source, organism. Optionally display only a specified attribute

Providers

Post Organism Xrefsbatch

Global
v1.0.0

Returns a list of xrefs, per identifier, that maps to a given list of identifiers an data source given an organism.

Providers

Post Organism Xrefsbatch Systemcode

Global
v1.0.0

Returns a list of xrefs, that maps to a given list of identifiers to a given data source and organism.

Providers

Get Organism Attributeset

Global
v1.0.0

Returns the supported attributes to the given Organism.

Providers

Get Organism Search Query

Global
v1.0.0

Returns a list of xrefs with identifiers that contain the query string for a given organism. Results are not restricted to exact matches. Optionally l...

Providers

Get Organism Sourcedatasources

Global
v1.0.0

Returns a list of data sources available as xref sources for a given organism.

Providers

Get Organism Xrefs Systemcode Identifier

Global
v1.0.0

Returns a list of xrefs that map to a given identifier, data source, and organism.

Providers

Get Organism Targetdatasources

Global
v1.0.0

Returns a list of data sources available as xref targets for a given organism.

Providers

Get Organism Attributesearch Query

Global
v1.0.0

Returns a list of xrefs and associated attributes that contain the query string for a given organism. Results are not restricted to exact matches. Opt...

Providers

Get Organism Xrefexists Systemcode Identifier

Global
v1.0.0

Returns `true` or `false` based on whether or not an xref exists in the database given an identifier, data source, and organism.

Providers

Get Organism Ismappingsupported Sourcesystemcode Targetsystemcode

Global
v1.0.0

Returns `true` or `false` based on whether or not /{organism}/xrefs/{systemCode}/{identifier} would possibly return a {targetSystemCode} result given ...

Providers

Get Organism Properties

Global
v1.0.0

Returns the list of properties available for a given organism

Providers

Get Organism Isfreesearchsupported

Global
v1.0.0

Returns `true` or `false` based on whether or not /{organism}/search/{query} is supported for a given organism.

Providers

Required Providers (1)

Bridgedb Org

Open Data
bridgedb webservices API

Setup Instructions

Connect this Bridgedb Org Tools MCP server to any MCP client in minutes

Compatible with Claude Desktop, Cursor, and all Model Context Protocol clients

https://mcp.mcpbundles.com/bundle/bridgedb-org

What is MCP?

Model Context Protocol lets AI tools call external capabilities securely through a single URL. This bundle groups tools behind an MCP endpoint that many clients can use.

Use this bundle in 3 steps

  1. Copy the MCP URL above
  2. Open your AI tool and add a new MCP/connector
  3. Paste the URL and follow any auth prompts

⚡ Claude Desktop Users

Skip the manual setup! Use the .mcpb file format for one-click installation. Check the Claude Desktop tab for setup instructions.

Pick your tool tab for exact steps

Select ChatGPT, Cursor, Claude Code, or another tab for copy-paste config.

Ready to use Bridgedb Org Tools?

Get started with this MCP server bundle and connect it to your MCP client

Bridgedb Org Tools MCP Server - MCP Bundles • MCP Bundles